已发表论文

基于新一代测序的神经纤维瘤病 1 型患者潜在调节基因的研究

 

Authors Yang F, Xu S, Liu RW, Shi T, Li XF, Li XB, Chen G, Liu HY, Zhou QH, Chen J

Received 14 November 2017

Accepted for publication 20 December 2017

Published 21 February 2018 Volume 2018:11 Pages 919—932

DOI https://doi.org/10.2147/OTT.S156998

Checked for plagiarism Yes

Review by Single-blind

Peer reviewers approved by Dr Colin Mak

Peer reviewer comments 2

Editor who approved publication: Dr William Cho

Introduction: Neurofibromatosis type 1 (NF1) is a common Mendelian multi-system disorder that is characterized by café-au-lait spots (CLS), axillary freckling, optic glioma and plexiform neurofibroma. Various mutations of the NF1  gene are widely accepted to be the main cause of this disease, while whether there are still certain other modifier genes that could influence the phenotypes of NF1 is our concern.
Patients and Methods: One proband and his father are involved, who are characterized by plexiform neurofibroma and cutaneous neurofibroma, respectively. Enhanced Computed tomography (CT) and Positron emission tomography-CT (PET-CT) were taken to collect the radiographic data, and the specimens of this neurofibroma as well as the blood samples from the father and son were sent for panel mutation screening of 295 tumor-related genes based on next-generation screening. Furthermore, the NF1 gene mutations were referred with Canis lupus familiaris Rattus norvegicus Gallus gallus Danio rerio , and Drosophila melanogaster  NF1 sequencing for evolutionary conservativeness and then analyzed in Condel databases for pathogenicity prediction.
Results: The radiography indicated that the benign plexiform neurofibroma only occurred in the son. Also, TP53 FANCA BCL6 PIK3C2G RNF43 FGFR4 FLT3 ERBB2 PAK7 NSD1 MEN1  and TSC1  were uniquely found mutated in the son, which could be candidates as new modifier genes; besides, RNF43  was also mutated in public neurofibroma seuquencing data. By KEGG pathway annotation, phosphoinositide-3-kinase-Akt pathway was altered in both the public plexiform neurofibroma sample and in our proband patient.
Conclusion: This study reexamined the background germline mutations and suggested their potential value as modifier genes that may influence the phenotype heterogenity.
Keywords: plexiform, neurofibroma type 1, mutation, modifier gene, next-generation sequencing