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宏基因组二代测序辅助诊断1例免疫功能正常患者戈登分枝杆菌肺炎:病例报告和文献复习

 

Authors Shi S, Gai W, Huang H, Zheng Y , Zhang X, Dai Y, Wu C

Received 5 September 2024

Accepted for publication 26 November 2024

Published 9 December 2024 Volume 2024:17 Pages 5481—5489

DOI https://doi.org/10.2147/IDR.S494310

Checked for plagiarism Yes

Review by Single anonymous peer review

Peer reviewer comments 2

Editor who approved publication: Prof. Dr. Héctor Mora-Montes

Shengqiao Shi,1,* Wei Gai,2,* Hui Huang,1 Yafeng Zheng,2 Xiaojing Zhang,2,3 Yuanrong Dai,1 Chengyun Wu1 

1Department of Respiratory Medicine, The 2nd Affiliated Hospital of Wenzhou Medical University, Wenzhou, Zhejiang, People’s Republic of China; 2WillingMed Technology (Beijing) Co., Ltd, Beijing, People’s Republic of China; 3CAS Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, People’s Republic of China

*These authors contributed equally to this work

Correspondence: Chengyun Wu; Yuanrong Dai, Department of Respiratory Medicine, The 2nd Affiliated Hospital of Wenzhou Medical University, No. 109, College West Road, Wenzhou, Zhejiang, 325027, People’s Republic of China, Email wcy857516126@126.com; daiyr@126.com

Introduction: Mycobacterium gordonae is a nonpathogenic pathogen commonly found in nature and is generally considered a contaminant in clinical practice. Although there have been few reported cases of infection, most of them are secondary to immunosuppression. This paper described a rare case of globular shadow in the chest of an immunocompetent male who was diagnosed with M. gordonae pulmonary disease. He went to the hospital with chest pains that had lasted for more than two weeks. The routine clinical pathogen detection failed to discover the cause of the infection. Although metagenomic next-generation sequencing (mNGS) of the lung tissue was negative, M. gordonae was detected in the background microorganism with only one read. Based on the pathological results, it was considered to be the causative pathogen. Two months of treatment with rifampicin, ethambutol, clarithromycin, and levofloxacin resulted in significant reduction and absorption of lung lesions. No abnormalities were detected in either lung one year later. The lack of positive culture and other conventional microbiological test results make this case is not a strictly confirmed case. This study also explored the clinical features and treatment options of 32 cases of M. gordonae pulmonary disease through a systematic review of the literature. Although there is no standard recommended treatment regimen for M. gordonae infection, but combination therapy with macrolides, rifampicin, and ethambutol has been proven effective.
Conclusion: This case highlights that when the clinical highly suspected of infection, mNGS can contribute to the early identification of non-tuberculous Mycobacterium (NTM) even with low reads, when clinical suspicion is high. Analyzing background microorganisms in sterile samples may help diagnose rare pathogens.

Keywords: Mycobacterium gordonae, globular shadow, pulmonary disease, nontuberculous mycobacterium, mNGS