已发表论文

将孟德尔随机化与机器学习相结合以识别慢性阻塞性肺疾病中与缺氧相关的诊断生物标志物及因果关系

 

Authors Fu W, Liu Y, Li R, Jin H 

Received 22 February 2025

Accepted for publication 20 July 2025

Published 12 September 2025 Volume 2025:20 Pages 3187—3202

DOI https://doi.org/10.2147/COPD.S524381

Checked for plagiarism Yes

Review by Single anonymous peer review

Peer reviewer comments 2

Editor who approved publication: Dr Vanesa Bellou

Wenhui Fu, Yangli Liu, Renjie Li, Haiying Jin

Department of Respiratory Medicine, Jinyun People’s Hospital, Lishui, Zhejiang, 321400, People’s Republic of China

Correspondence: Haiying Jin, Department of Respiratory Medicine, Jinyun People’s Hospital, No. 299 North Ziwei Road, Wuyun Street, Lishui, Zhejiang, 321400, People’s Republic of China, Tel +86 13754278979, Email jinhaiying8979@yeah.net

Background: Chronic obstructive pulmonary disease (COPD) involves progressive lung function decline, with hypoxia playing a key pathogenic role. However, systematic investigations focusing on hypoxia-related genes (HRGs) in COPD remain limited.
Methods: We applied machine learning to identify HRG-associated diagnostic biomarkers and evaluated their performance via Receiver Operating Characteristic (ROC) analysis. Mendelian randomization (MR) was conducted to assess causal relationships between candidate genes and COPD. A nomogram model was constructed to evaluate clinical utility, and a ceRNA network was developed using ENCORI database.
Results: Six HRG-based diagnostic biomarkers were identified, including SLC2A1, which demonstrated strong diagnostic value (AUC > 0.8). MR analysis revealed a significant causal effect of SLC2A1 expression on COPD risk (OR = 1.32, 95% CI: 1.02– 1.71, P < 0.05). Functional evidence suggests SLC2A1 promotes hypoxia-induced metabolic reprogramming in airway epithelial cells. The constructed nomogram showed good clinical applicability. ceRNA analysis highlighted MALAT1, NEAT1, and XIST as potential upstream regulators.
Conclusion: Our findings identify SLC2A1 as a causal and diagnostically relevant gene in COPD, offering novel insight into hypoxia-driven disease mechanisms and supporting future personalized therapeutic strategies.

Keywords: chronic obstructive pulmonary disease, hypoxia-related genes, Mendelian randomization, machine learning