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miR-133a-3p 下调表达在膀胱癌中的作用:一项生物信息学研究
Authors Gao L, Li SH, Tian YX, Zhu QQ, Chen G, Pang YY, Hu XH
Received 18 March 2017
Accepted for publication 9 May 2017
Published 20 July 2017 Volume 2017:10 Pages 3667—3683
DOI https://doi.org/10.2147/OTT.S137433
Checked for plagiarism Yes
Review by Single-blind
Peer reviewers approved by Dr Akshita Wason
Peer reviewer comments 4
Editor who approved publication: Dr William Cho
Abstract: It has
been discovered that miR-133a-3p acts as a tumor suppressor in bladder cancer
(BC). Nevertheless, the function of miR-133a-3p in BC remains unclarified.
Thus, we carried out this study to validate the expression of miR-133a-3p in BC
and provide insights into the molecular mechanism underlying it. To assess the
expression of miR-133a-3p in BC, we searched eligible studies from literature
and Gene expression Omnibus (GEO) to perform a meta-analysis. We also plotted
the summary receiver operating characteristic (SROC) curve to evaluate the
diagnostic ability of miR-133a-3p in BC. Additionally, the potential target
genes of miR-133a-3p were acquired from 14 online software programs and GEO
database. Protein-protein interaction (PPI) network was created to identify the
hub genes. Then, Gene Ontology (GO) functional annotation analysis and Kyoto
Encyclopedia of Genes and Genomes (KEGG) pathway analysis were carried out to
investigate the regulatory network of the target genes. From the meta-analysis,
miR-133a-3p was remarkably downregulated in BC tissues compared with that in
non-cancer tissues (standard mean difference =-3.84, 95% confidence
interval =-6.99–0.29). Moreover, results from SROC suggested that miR-133a-3p
exhibited the ability to diagnose BC (area under curve =0.8418). As for the
bioinformatics study, 488 genes were chosen as the potential targets of
miR-133a-3p in BC, among which 10 genes were defined as hub genes (all degrees
>5). Further GO and KEGG pathway analysis indicated that the target genes of
miR-133a-3p aggregated in specific biological process and pathways. In
conclusion, miR-133a-3p possessed great diagnostic potential with its
downregulation in BC, and miR-133a-3p might serve as a novel biomarker for BC.
Keywords: bladder cancer, target genes, miR-133a-3p, meta-analysis, bioinformatics
study
